Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g18669.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000103:11454...17071
NR annotation: CAH3155805.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR017921	Domain	Zinc finger, CTCHY-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR037275	Homologous_superfamily	Zinc finger, CTCHY-type superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21319	RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03142	TFIIH2, GTF2H2, SSL1; transcription initiation factor TFIIH subunit 2	-	DNA repair and recombination proteins	ko03400	deepkoala