Detailed information of Pocillopora_acuta_HIv2___RNAseq.g18970.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000004:740180...753399
NR annotation: XP_027046830.1, integrator complex subunit 11-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIH0Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1
Q503E1Integrator complex subunit 11 OS=Danio rerio OX=7955 GN=cpsf3l PE=2 SV=1
Q9CWS4Integrator complex subunit 11 OS=Mus musculus OX=10090 GN=Ints11 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10996Beta-CaspBeta-Casp domainDomainInterproscan
PF16661Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan
PF21386IntS11_CIntegrator IntS11, C-terminal domainDomainInterproscan
PF07521RMMBLZn-dependent metallo-hydrolase RNA specificity domainMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR022712DomainBeta-Casp domainInterproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR050698FamilyRNA Processing Metallo-Beta-Lactamase Domain-Containing ProteinInterproscan
IPR041897DomainIntegrator complex subunit 11, MBL-foldInterproscan
IPR048662DomainIntegrator complex subunit 11, C-terminal domainInterproscan
IPR011108DomainZn-dependent metallo-hydrolase, RNA specificity domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016180Biological ProcesssnRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13148CPSF3L, INTS11; integrator complex subunit 11EC:3.1.27.-
Spliceosomeko03041deepkoala

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