Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g1901.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000387:5312740...5318222
NR annotation: CAH3106293.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P31579	Low choriolytic enzyme OS=Oryzias latipes OX=8090 GN=lce PE=1 SV=1
P31580	High choriolytic enzyme 1 OS=Oryzias latipes OX=8090 GN=hcea PE=1 SV=1
P31581	High choriolytic enzyme 2 OS=Oryzias latipes OX=8090 GN=hceb PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR034035	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan