Detailed information of Pocillopora_acuta_HIv2___RNAseq.g19854.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000388:3971727...3976062
NR annotation: XP_027056407.1, uncharacterized protein LOC113683369 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q87PP5Glycine betaine/proline/choline/ectoine transporter VP1456 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1456 PE=1 SV=1
Q87NG3Glycine betaine transporter 1 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VP1905 PE=1 SV=1
G3XCN6Glycine betaine/proline betaine transporter BetS OS=Rhizobium meliloti OX=382 GN=betS PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04749PLAC8PLAC8 familyFamilyInterproscan
PF02028BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006461FamilyPLAC8 motif-containing proteinInterproscan
IPR000060FamilyBCCT transporter familyInterproscan
IPR018093Conserved_siteBCCT transporter, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705Biological Processnitrogen compound transportInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

TOP