Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g20290.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000026:2107113...2107808
NR annotation: XP_027042021.1, cadherin EGF LAG seven-pass G-type receptor 3-like, partial [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q2PZL6	Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7	Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
O88277	Protocadherin Fat 2 OS=Rattus norvegicus OX=10116 GN=Fat2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028	Cadherin	Cadherin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126	Domain	Cadherin-like	Interproscan
IPR050174	Family	Protocadherin/Cadherin-related Cell Adhesion	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24028	CADHERIN-87A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan