Genomic Location: Pocillopora_acuta_HIv2___Sc0000026:2741140...2763249
NR annotation: CAH3153648.1, unnamed protein product [Pocillopora meandrina]
| CDS | ||||
| Pocillopora_acuta_HIv2___RNAseq.g20313.t1 | ||||
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g20313.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g20313.t1 |
| Uniprot term | Description |
|---|---|
| Q28107 | Coagulation factor V OS=Bos taurus OX=9913 GN=F5 PE=1 SV=1 |
| O35276 | Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1 |
| O35375 | Neuropilin-2 OS=Mus musculus OX=10090 GN=Nrp2 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00754 | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF07885 | Ion_trans_2 | Ion channel | Family | Interproscan |
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000421 | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR013099 | Domain | Potassium channel domain | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR051022 | Family | Notch Signaling and Cell Fate Determination | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24049 | CRUMBS FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007157 | Biological Process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules | Interproscan |
| GO:0032991 | Cellular Component | protein-containing complex | Interproscan |
| GO:0045197 | Biological Process | establishment or maintenance of epithelial cell apical/basal polarity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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