Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g2040.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000387:6641029...6642819
NR annotation: CAH3106024.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q5U374	Kelch-like protein 12 OS=Danio rerio OX=7955 GN=klhl12 PE=2 SV=2
Q6NRH0	Kelch-like protein 12 OS=Xenopus laevis OX=8355 GN=klhl12 PE=2 SV=2
Q8CA72	Gigaxonin OS=Mus musculus OX=10090 GN=Gan PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan
PF00651	BTB	BTB/POZ domain	Domain	Interproscan
PF07707	BACK	BTB And C-terminal Kelch	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011705	Domain	BTB/Kelch-associated	Interproscan
IPR017096	Family	BTB-kelch protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632	LD33804P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan