Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g20400.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000023:864276...874294
NR annotation: CAH3162129.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5ZL98	DNA-directed RNA polymerase III subunit RPC1 OS=Gallus gallus OX=9031 GN=POLR3A PE=2 SV=1
O14802	DNA-directed RNA polymerase III subunit RPC1 OS=Homo sapiens OX=9606 GN=POLR3A PE=1 SV=2
A4IF62	DNA-directed RNA polymerase III subunit RPC1 OS=Bos taurus OX=9913 GN=POLR3A PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00623	RNA_pol_Rpb1_2	RNA polymerase Rpb1, domain 2	Domain	Interproscan
PF04997	RNA_pol_Rpb1_1	RNA polymerase Rpb1, domain 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006592	Domain	RNA polymerase, N-terminal	Interproscan
IPR000722	Domain	RNA polymerase, alpha subunit	Interproscan
IPR007080	Domain	RNA polymerase Rpb1, domain 1	Interproscan
IPR045867	Family	DNA-directed RNA polymerase, subunit beta-prime	Interproscan
IPR044893	Homologous_superfamily	RNA polymerase Rpb1, clamp domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19376	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0001056	Molecular Function	RNA polymerase III activity	Interproscan
GO:0005666	Cellular Component	RNA polymerase III complex	Interproscan