Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g20713.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000024:302956...308772
NR annotation: CAH3039294.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8RXU4	Low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=THA1 PE=1 SV=1
Q9FPH3	Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=THA2 PE=1 SV=1
O07051	L-allo-threonine aldolase OS=Aeromonas jandaei OX=650 GN=ltaA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01212	Beta_elim_lyase	Beta-eliminating lyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR001597	Domain	Aromatic amino acid beta-eliminating lyase/threonine aldolase	Interproscan
IPR023603	Family	Low specificity L-threonine aldolase-like	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48097	L-THREONINE ALDOLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006545	Biological Process	glycine biosynthetic process	Interproscan
GO:0006567	Biological Process	threonine catabolic process	Interproscan
GO:0008732	Molecular Function	L-allo-threonine aldolase activity	Interproscan
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0016829	Molecular Function	lyase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01620	ltaE; threonine aldolase	EC:4.1.2.48	Glycine, serine and threonine metabolism	ko00260	deepkoala