Detailed information of Pocillopora_acuta_HIv2___RNAseq.g20804.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000024:1717206...1734434
NR annotation: CAH3137833.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5YCC5Transmembrane channel-like protein 7 OS=Gallus gallus OX=9031 GN=Tmc7 PE=2 SV=1
Q6UXY8Transmembrane channel-like protein 5 OS=Homo sapiens OX=9606 GN=TMC5 PE=1 SV=3
Q5M7W4Transmembrane channel-like protein 5 OS=Rattus norvegicus OX=10116 GN=Tmc5 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07810TMCTMC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038900FamilyTransmembrane channel-like proteinInterproscan
IPR012496DomainTMC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23302TRANSMEMBRANE CHANNEL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008381Molecular Functionmechanosensitive monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21988TMC; transmembrane channel-like protein-Cilium and associated proteinsko03037deepkoala

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