Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g21240.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000031:616904...617458
NR annotation: CAH3116812.1, unnamed protein product, partial [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q66HH3	Protein lyl-1 OS=Rattus norvegicus OX=10116 GN=Lyl1 PE=2 SV=1
P27792	Protein lyl-1 OS=Mus musculus OX=10090 GN=Lyl1 PE=2 SV=2
O93507	T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio rerio OX=7955 GN=tal1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR040238	Family	Helix-loop-helix protein TAL-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13864	T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan