Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g21269.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000031:888105...891497
NR annotation: XP_027041307.1, uncharacterized protein LOC113669472 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A3FM55	C-type lectin 1 OS=Hydrophis hardwickii OX=8781 PE=2 SV=1
Q5U3G1	Collectin-11 OS=Danio rerio OX=7955 GN=colec11 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan