Detailed information of Pocillopora_acuta_HIv2___RNAseq.g21419.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000017:838717...839277
NR annotation: XP_027049844.1, POU domain, class 3, transcription factor 3-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q812B1POU domain, class 3, transcription factor 4 OS=Mesocricetus auratus OX=10036 GN=Pou3f4 PE=2 SV=1
P62515POU domain, class 3, transcription factor 4 OS=Mus musculus OX=10090 GN=Pou3f4 PE=2 SV=1
P62516POU domain, class 3, transcription factor 4 OS=Rattus norvegicus OX=10116 GN=Pou3f4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF00157PouPou domain - N-terminal to homeobox domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000327DomainPOU-specific domainInterproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR050255FamilyPOU domain transcription factorInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR013847DomainPOU domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11636POU DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09365POU3F, OTF; POU domain transcription factor, class 3-Transcription factorsko03000deepkoala

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