Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g21493.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000017:1933377...1939007
NR annotation: CAH3112967.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P48728	Aminomethyltransferase, mitochondrial OS=Homo sapiens OX=9606 GN=AMT PE=1 SV=1
P25285	Aminomethyltransferase, mitochondrial OS=Bos taurus OX=9913 GN=AMT PE=1 SV=1
Q8CFA2	Aminomethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Amt PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01571	GCV_T	Aminomethyltransferase folate-binding domain	Domain	Interproscan
PF08669	GCV_T_C	Glycine cleavage T-protein C-terminal barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029043	Homologous_superfamily	Glycine cleavage T-protein/YgfZ, C-terminal	Interproscan
IPR006222	Domain	Aminomethyltransferase, folate-binding domain	Interproscan
IPR027266	Homologous_superfamily	GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1	Interproscan
IPR028896	Family	Aminomethyltransferase-like	Interproscan
IPR013977	Domain	Glycine cleavage T-protein, C-terminal barrel domain	Interproscan
IPR006223	Family	Glycine cleavage system T protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43757	AMINOMETHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0004047	Molecular Function	aminomethyltransferase activity	Interproscan
GO:0006546	Biological Process	glycine catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00605	gcvT, AMT; glycine cleavage system T protein (aminomethyltransferase)	EC:2.1.2.10	One carbon pool by folate	ko00670	deepkoala