Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g21660.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000316:19583...22041
NR annotation: CAH3118732.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q15428	Splicing factor 3A subunit 2 OS=Homo sapiens OX=9606 GN=SF3A2 PE=1 SV=2
Q6AXT8	Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1
A5PJN8	Splicing factor 3A subunit 2 OS=Bos taurus OX=9913 GN=SF3A2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR052092	Family	Splicing Factor 3A Subunit 2	Interproscan
IPR000690	Domain	Matrin/U1-C, C2H2-type zinc finger	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23205	SPLICING FACTOR 3A SUBUNIT 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000245	Biological Process	spliceosomal complex assembly	Interproscan
GO:0005686	Cellular Component	U2 snRNP	Interproscan
GO:0071004	Cellular Component	U2-type prespliceosome	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan