Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g2170.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000387:8292685...8302090
NR annotation: ,

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q5SRX1	TOM1-like protein 2 OS=Mus musculus OX=10090 GN=Tom1l2 PE=1 SV=1
Q6ZVM7	TOM1-like protein 2 OS=Homo sapiens OX=9606 GN=TOM1L2 PE=1 SV=1
O60784	Target of Myb1 membrane trafficking protein OS=Homo sapiens OX=9606 GN=TOM1 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|VHS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00790	VHS	VHS domain	Repeat	Interproscan
PF03127	GAT	GAT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002014	Domain	VHS domain	Interproscan
IPR004152	Domain	GAT domain	Interproscan
IPR008942	Homologous_superfamily	ENTH/VHS	Interproscan
IPR038425	Homologous_superfamily	GAT domain superfamily	Interproscan
IPR014645	Family	Target of Myb protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13856	VHS DOMAIN CONTAINING PROTEIN FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005768	Cellular Component	endosome	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26401	TOM1, TOM1L1_2; target of Myb membrane trafficking protein 1 and related proteins	-	Membrane trafficking	ko04131	deepkoala