Detailed information of Pocillopora_acuta_HIv2___RNAseq.g22455.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000016:2129870...2140672
NR annotation: XP_027057952.1, pre-mRNA cleavage complex 2 protein Pcf11-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O94913Pre-mRNA cleavage complex 2 protein Pcf11 OS=Homo sapiens OX=9606 GN=PCF11 PE=1 SV=3
G3X9Z4Pre-mRNA cleavage complex 2 protein Pcf11 OS=Mus musculus OX=10090 GN=Pcf11 PE=2 SV=1
Q0WPF2Polyadenylation and cleavage factor homolog 4 OS=Arabidopsis thaliana OX=3702 GN=PCFS4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047415DomainPcf11, CID domainInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan
IPR002014DomainVHS domainInterproscan
IPR006569DomainCID domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14400PCF11; pre-mRNA cleavage complex 2 protein Pcf11-Messenger RNA biogenesisko03019deepkoala

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