Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g22772.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000000:2091975...2092439
NR annotation: RMX56877.1, hypothetical protein pdam_00006290 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O42606	Neurogenin-1 OS=Danio rerio OX=7955 GN=neurog1 PE=2 SV=1
Q9H2A3	Neurogenin-2 OS=Homo sapiens OX=9606 GN=NEUROG2 PE=1 SV=2
O13126	Transcription factor Atoh7-b OS=Xenopus laevis OX=8355 GN=atoh7-b PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050359	Family	Basic helix-loop-helix transcription factors	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19290	BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09083	ATOH1_7; atonal protein 1/7	-	Transcription factors	ko03000	deepkoala