Detailed information of Pocillopora_acuta_HIv2___RNAseq.g22979.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000000:5190775...5225496
NR annotation: CAH3146798.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UKP5A disintegrin and metalloproteinase with thrombospondin motifs 6 OS=Homo sapiens OX=9606 GN=ADAMTS6 PE=1 SV=2
P58459A disintegrin and metalloproteinase with thrombospondin motifs 10 OS=Mus musculus OX=10090 GN=Adamts10 PE=2 SV=3
Q9H324A disintegrin and metalloproteinase with thrombospondin motifs 10 OS=Homo sapiens OX=9606 GN=ADAMTS10 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR006586DomainADAM, cysteine-rich domainInterproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR006150RepeatCysteine-rich repeatInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0032991Cellular Componentprotein-containing complexInterproscan
GO:0045197Biological Processestablishment or maintenance of epithelial cell apical/basal polarityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

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