Detailed information of Pocillopora_acuta_HIv2___RNAseq.g22994.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000000:5367789...5375186
NR annotation: XP_027040506.1, replication factor C subunit 4-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99J62Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1
P35249Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2
Q54MD4Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF08542Rep_fac_CReplication factor C C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003593DomainAAA+ ATPase domainInterproscan
IPR047854DomainReplication factor C, lid domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050238FamilyDNA Replication and Repair Clamp Loader ComplexInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR013748DomainReplication factor C, C-terminalInterproscan
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003689Molecular FunctionDNA clamp loader activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005663Cellular ComponentDNA replication factor C complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10755RFC2_4; replication factor C subunit 2/4-DNA repair and recombination proteinsko03400deepkoala

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