Detailed information of Pocillopora_acuta_HIv2___RNAseq.g23212.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000000:8698939...8709194
NR annotation: CAH3158838.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2VLG6Scavenger receptor cysteine-rich type 1 protein M130 OS=Canis lupus familiaris OX=9615 GN=CD163 PE=2 SV=1
P30205Antigen WC1.1 OS=Bos taurus OX=9913 PE=2 SV=1
Q8BV57Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D OS=Mus musculus OX=10090 GN=Ssc5d PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR033116Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR017448DomainSRCR-like domainInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan

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