Detailed information of Pocillopora_acuta_HIv2___RNAseq.g23907.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000040:759644...797715
NR annotation: CAH3155118.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35161Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus OX=10090 GN=Celsr1 PE=1 SV=3
Q91ZI0Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus OX=10090 GN=Celsr3 PE=2 SV=2
O88278Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus OX=10116 GN=Celsr3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF02793HRMHormone receptor domainFamilyInterproscan
PF16489GAINGPCR-Autoproteolysis INducing (GAIN) domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001791DomainLaminin G domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001879DomainGPCR, family 2, extracellular hormone receptor domainInterproscan
IPR008077FamilyGPCR, family 2, brain-specific angiogenesis inhibitorInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR036445Homologous_superfamilyGPCR family 2, extracellular hormone receptor domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR032471DomainGAIN domain, N-terminalInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12011ADHESION G-PROTEIN COUPLED RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016525Biological Processnegative regulation of angiogenesisInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007189Biological Processadenylate cyclase-activating G protein-coupled receptor signaling pathwayInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04600CELSR1; cadherin EGF LAG seven-pass G-type receptor 1-Cell adhesion moleculesko04515deepkoala

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