Detailed information of Pocillopora_acuta_HIv2___RNAseq.g24901.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000002:2800946...2807462
NR annotation: XP_027052557.1, uncharacterized protein LOC113679789 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P09238Stromelysin-2 OS=Homo sapiens OX=9606 GN=MMP10 PE=1 SV=1
P28862Stromelysin-1 OS=Mus musculus OX=10090 GN=Mmp3 PE=2 SV=2
P79227Macrophage metalloelastase OS=Oryctolagus cuniculus OX=9986 GN=MMP12 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR018486Conserved_siteHemopexin, conserved siteInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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