Detailed information of Pocillopora_acuta_HIv2___RNAseq.g24902.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000002:2811106...2817048
NR annotation: XP_027052557.1, uncharacterized protein LOC113679789 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O55123Stromelysin-2 OS=Mus musculus OX=10090 GN=Mmp10 PE=2 SV=1
P28862Stromelysin-1 OS=Mus musculus OX=10090 GN=Mmp3 PE=2 SV=2
P03957Stromelysin-1 OS=Rattus norvegicus OX=10116 GN=Mmp3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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