Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g25242.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000002:6494204...6497784
NR annotation: XP_027054389.1, transcriptional repressor protein YY1-like isoform X1 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P25490	Transcriptional repressor protein YY1 OS=Homo sapiens OX=9606 GN=YY1 PE=1 SV=2
Q00899	Transcriptional repressor protein YY1 OS=Mus musculus OX=10090 GN=Yy1 PE=1 SV=1
O15391	Transcription factor YY2 OS=Homo sapiens OX=9606 GN=YY2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR017114	Family	C2H2-type Zinc finger protein, YY1-like	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14003	TRANSCRIPTIONAL REPRESSOR PROTEIN YY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000790	Cellular Component	chromatin	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0031519	Cellular Component	PcG protein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09201	YY; transcription factor YY	-	Mitochondrial biogenesis	ko03029	deepkoala