Detailed information of Pocillopora_acuta_HIv2___RNAseq.g25501.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000002:9981244...9993911
NR annotation: XP_027043311.1, S1 RNA-binding domain-containing protein 1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RDI0S1 RNA-binding domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SRBD1 PE=2 SV=1
Q8N5C6S1 RNA-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SRBD1 PE=1 SV=2
Q497V5S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17674HHH_9HHH domainDomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF16921Tex_YqgFTex protein YqgF-like domainDomainInterproscan
PF12836HHH_3Helix-hairpin-helix motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006641DomainYqgF/RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041692DomainHHH domain 9Interproscan
IPR003029DomainS1 domainInterproscan
IPR032639DomainTex protein, YqgF-like domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR037027Homologous_superfamilyYqgF/RNase H-like domain superfamilyInterproscan
IPR050437FamilyBacterial ribosomal protein bS1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1072430S RIBOSOMAL PROTEIN S1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

TOP