Detailed information of Pocillopora_acuta_HIv2___RNAseq.g25721.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000008:1444923...1451912
NR annotation: XP_027057429.1, nucleoporin NUP35-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P6X9Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1
Q8NFH5Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1
Q8R4R6Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05172Nup35_RRMNup53/35/40-type RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR017389FamilyNucleoporin, NUP53Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR007846DomainRNA-recognition motif (RRM) Nup35-type domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21527NUCLEOPORIN NUP35Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0006607Biological ProcessNLS-bearing protein import into nucleusInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0006999Biological Processnuclear pore organizationInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0031965Cellular Componentnuclear membraneInterproscan
GO:0044613Cellular Componentnuclear pore central transport channelInterproscan
GO:0044615Cellular Componentnuclear pore nuclear basketInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14313NUP35, NUP53; nuclear pore complex protein Nup53-Messenger RNA biogenesisko03019deepkoala

TOP