Genomic Location: Pocillopora_acuta_HIv2___Sc0000008:3893931...3908716
NR annotation: XP_027041792.1, uncharacterized protein LOC113669903 [Pocillopora damicornis]
| CDS | ||||
| Pocillopora_acuta_HIv2___RNAseq.g25898.t1a | ||||
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g25898.t1a |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g25898.t1a |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q95SX7 | Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1 | |||
| O88943 | Potassium voltage-gated channel subfamily KQT member 2 OS=Rattus norvegicus OX=10116 GN=Kcnq2 PE=1 SV=1 | |||
| O43526 | Potassium voltage-gated channel subfamily KQT member 2 OS=Homo sapiens OX=9606 GN=KCNQ2 PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF07885 | Ion_trans_2 | Ion channel | Family | Interproscan |
| PF00060 | Lig_chan | Ligand-gated ion channel | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR013099 | Domain | Potassium channel domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR001320 | Domain | Ionotropic glutamate receptor, C-terminal | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33395 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0015276 | Molecular Function | ligand-gated monoatomic ion channel activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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