Detailed information of Pocillopora_acuta_HIv2___RNAseq.g26318.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000029:11677...34421
NR annotation: XP_027049169.1, heterogeneous nuclear ribonucleoprotein L-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1LQ48Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2
P14866Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens OX=9606 GN=HNRNPL PE=1 SV=2
Q8R081Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13893RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan
PF11835RRM_8RRM-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR021790DomainPTBP1-like, RNA recognition motif 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0043484Biological Processregulation of RNA splicingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13159HNRNPL; heterogeneous nuclear ribonucleoprotein L-Spliceosomeko03041deepkoala

TOP