Detailed information of Pocillopora_acuta_HIv2___RNAseq.g26474.t1a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000029:1287899...1297582
NR annotation: CAH3111362.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P09057Ornithine decarboxylase OS=Rattus norvegicus OX=10116 GN=Odc1 PE=1 SV=1
P27119Ornithine decarboxylase OS=Mus pahari OX=10093 GN=Odc1 PE=2 SV=1
P00860Ornithine decarboxylase OS=Mus musculus OX=10090 GN=Odc1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR022653Binding_siteOrn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding siteInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan

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