Detailed information of Pocillopora_acuta_HIv2___RNAseq.g26783.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000022:3378344...3390273
NR annotation: XP_027042929.1, protein mesh-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UGT4Sushi domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SUSD2 PE=1 SV=1
Q8JZM8Mucin-4 OS=Mus musculus OX=10090 GN=Muc4 PE=2 SV=2
Q03472Apolipoprotein R OS=Sus scrofa OX=9823 GN=APOR PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06119NIDONidogen-likeFamilyInterproscan
PF03782AMOPAMOP domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR005533DomainAMOP domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR051495FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13802MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23820SUSD2; sushi domain-containing protein 2-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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