Detailed information of Pocillopora_acuta_HIv2___RNAseq.g26989.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000014:2997273...3015472
NR annotation: XP_027047937.1, general vesicular transport factor p115-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60763General vesicular transport factor p115 OS=Homo sapiens OX=9606 GN=USO1 PE=1 SV=2
P41541General vesicular transport factor p115 OS=Bos taurus OX=9913 GN=USO1 PE=1 SV=1
Q9Z1Z0General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04869Uso1_p115_headUso1 / p115 like vesicle tethering protein, head regionRepeatInterproscan
PF04871Uso1_p115_CUso1 / p115 like vesicle tethering protein, C terminal regionFamilyInterproscan
PF18770Arm_vescicularArmadillo tether-repeat of vescicular transport factorRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR006953DomainVesicle tethering protein Uso1/P115-like, head domainInterproscan
IPR006955DomainUso1/p115-like vesicle tethering protein, C-terminalInterproscan
IPR041209RepeatVesicle tethering protein p115, armadillo tether-repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10013GENERAL VESICULAR TRANSPORT FACTOR P115Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0048280Biological Processvesicle fusion with Golgi apparatusInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005795Cellular ComponentGolgi stackInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0012507Cellular ComponentER to Golgi transport vesicle membraneInterproscan
GO:0045056Biological ProcesstranscytosisInterproscan
GO:0048211Biological ProcessGolgi vesicle dockingInterproscan
GO:0061025Biological Processmembrane fusionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20361USO1; intracellular protein transport protein USO1-Membrane traffickingko04131deepkoala

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