Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g27065.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000014:3949271...3955568
NR annotation: XP_027050048.1, copper chaperone for superoxide dismutase-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9JK72	Copper chaperone for superoxide dismutase OS=Rattus norvegicus OX=10116 GN=Ccs PE=1 SV=1
Q9WU84	Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1
Q6PWT7	Copper chaperone for superoxide dismutase OS=Sus scrofa OX=9823 GN=CCS PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00403	HMA	Heavy-metal-associated domain	Domain	Interproscan
PF00080	Sod_Cu	Copper/zinc superoxide dismutase (SODC)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036423	Homologous_superfamily	Superoxide dismutase-like, copper/zinc binding domain superfamily	Interproscan
IPR024134	Family	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	Interproscan
IPR006121	Domain	Heavy metal-associated domain, HMA	Interproscan
IPR001424	Domain	Superoxide dismutase, copper/zinc binding domain	Interproscan
IPR036163	Homologous_superfamily	Heavy metal-associated domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006801	Biological Process	superoxide metabolic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0016532	Molecular Function	superoxide dismutase copper chaperone activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04569	CCS; copper chaperone for superoxide dismutase	-	Pathways of neurodegeneration - multiple diseases	ko05022	deepkoala