Detailed information of Pocillopora_acuta_HIv2___RNAseq.g27441.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:620879...627623
NR annotation: CAH3126245.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9N3X8Protein sidekick homolog OS=Caenorhabditis elegans OX=6239 GN=rig-4 PE=1 SV=2
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3
Q63198Contactin-1 OS=Rattus norvegicus OX=10116 GN=Cntn1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR050449FamilyEphrin receptor tyrosine kinasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46877EPH RECEPTOR A5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005005Molecular Functiontransmembrane-ephrin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0048013Biological Processephrin receptor signaling pathwayInterproscan

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