Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g27678.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:3799598...3805052
NR annotation: XP_027058220.1, LIM domain only protein 3-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q924W9	Rhombotin-1 OS=Mus musculus OX=10090 GN=Lmo1 PE=2 SV=1
Q99MB5	LIM domain only protein 3 OS=Rattus norvegicus OX=10116 GN=Lmo3 PE=2 SV=2
P25800	Rhombotin-1 OS=Homo sapiens OX=9606 GN=LMO1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR050945	Family	LMO/RBTN Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45787	LD11652P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0140297	Molecular Function	DNA-binding transcription factor binding	Interproscan