Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g27856.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:5200129...5205531
NR annotation: XP_027045821.1, E3 ubiquitin-protein ligase UHRF1-like isoform X2 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
J9VHE9	UHRF1-like protein OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=UHF1 PE=3 SV=2
Q96T88	E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens OX=9606 GN=UHRF1 PE=1 SV=1
Q8VDF2	E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02182	SAD_SRA	SAD/SRA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036987	Homologous_superfamily	SRA-YDG superfamily	Interproscan
IPR003105	Domain	SRA-YDG	Interproscan
IPR015947	Homologous_superfamily	PUA-like superfamily	Interproscan
IPR045134	Family	UHRF1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14140	E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0010216	Biological Process	obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10638	UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1	EC:2.3.2.27	Chromosome and associated proteins	ko03036	deepkoala