Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28040.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:7458705...7467178
NR annotation: XP_022781099.1, WD repeat-containing protein 55-like isoform X3 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
A1L112	WD repeat-containing protein 55 OS=Rattus norvegicus OX=10116 GN=Wdr55 PE=2 SV=1
Q58DT8	WD repeat-containing protein 55 OS=Bos taurus OX=9913 GN=WDR55 PE=2 SV=1
Q5R9T6	WD repeat-containing protein 55 OS=Pongo abelii OX=9601 GN=WDR55 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12894	ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	Repeat	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024977	Domain	Anaphase-promoting complex subunit 4-like, WD40 domain	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR050505	Family	WD repeat-containing protein WDR55/POC1	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44019	WD REPEAT-CONTAINING PROTEIN 55	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24750	WDR55, JIP5; WD repeat-containing protein 55	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala