Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28120.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:8524374...8531277
NR annotation: XP_027047422.1, hemicentin-1-like, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15394Neural cell adhesion molecule 2 OS=Homo sapiens OX=9606 GN=NCAM2 PE=1 SV=2
P13590Neural cell adhesion molecule 1 OS=Gallus gallus OX=9031 GN=NCAM1 PE=1 SV=3
Q3UQ28Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
----

TOP