Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28173.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:9187054...9189270
NR annotation: XP_027047442.1, E3 ubiquitin-protein ligase TRIM71-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99PP7E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus OX=10090 GN=Trim33 PE=1 SV=2
Q9UPN9E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens OX=9606 GN=TRIM33 PE=1 SV=3
Q56R14E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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