Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28196.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:9483328...9495185
NR annotation: XP_022806681.1, uncharacterized protein LOC111343760 isoform X1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16112Aggrecan core protein OS=Homo sapiens OX=9606 GN=ACAN PE=1 SV=3
Q91ZW8CD209 antigen-like protein D OS=Mus musculus OX=10090 GN=Cd209d PE=2 SV=1
Q91ZW7CD209 antigen-like protein E OS=Mus musculus OX=10090 GN=Cd209e PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR037221Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR050111FamilyC-type lectin and snaclec domain-containing proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22803MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

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