Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28435.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:12336644...12342995
NR annotation: CAH3103851.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q99PL6	UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 PE=1 SV=1
Q9BZV1	UBX domain-containing protein 6 OS=Homo sapiens OX=9606 GN=UBXN6 PE=1 SV=1
Q2KIJ6	UBX domain-containing protein 6 OS=Bos taurus OX=9913 GN=UBXN6 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|UBX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09409	PUB	PUB domain	Domain	Interproscan
PF00789	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036339	Homologous_superfamily	PUB-like domain superfamily	Interproscan
IPR001012	Domain	UBX domain	Interproscan
IPR018997	Domain	PUB domain	Interproscan
IPR042774	Domain	UBXN6, PUB domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23153	UBX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14011	UBXN6, UBXD1; UBX domain-containing protein 6	-	Protein processing in endoplasmic reticulum	ko04141	deepkoala