Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28704.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:15665368...15670201
NR annotation: XP_027058285.1, chromatin complexes subunit BAP18-like isoform X1 [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DCT6BPTF-associated chromatin complex component 1 OS=Mus musculus OX=10090 GN=Bacc1 PE=1 SV=1
Q8IXM2BPTF-associated chromatin complex component 1 OS=Homo sapiens OX=9606 GN=BACC1 PE=1 SV=1
Q32LD1BPTF-associated chromatin complex component 1 OS=Bos taurus OX=9913 GN=BACC1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005787 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249
all species →		Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051754
all species →		FamilyChromatin and ER Membrane Complex ProteinInterproscan
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21397
all species →		CHROMATIN COMPLEXES SUBUNIT BAP18-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016589
all species →		Cellular ComponentNURF complexInterproscan
GO:0071339
all species →		Cellular ComponentMLL1 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23406BAP18; chromatin complexes subunit BAP18-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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