Detailed information of Pocillopora_acuta_HIv2___RNAseq.g28865.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000390:1918502...1933108
NR annotation: XP_027042133.1, ubiquitin carboxyl-terminal hydrolase 40-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9NVE5Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens OX=9606 GN=USP40 PE=1 SV=3
Q8BWR4Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus OX=10090 GN=Usp40 PE=1 SV=2
Q24574Ubiquitin carboxyl-terminal hydrolase 47 OS=Drosophila melanogaster OX=7227 GN=Usp47 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11869USP40; ubiquitin carboxyl-terminal hydrolase 40EC:3.4.19.12
Ubiquitin systemko04121deepkoala

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