Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g2905.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000009:5181353...5187420
NR annotation: CAH3031092.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q6PDI6	Ubiquitin carboxyl-terminal hydrolase MINDY-2 OS=Mus musculus OX=10090 GN=Mindy2 PE=1 SV=1
Q8NBR6	Ubiquitin carboxyl-terminal hydrolase MINDY-2 OS=Homo sapiens OX=9606 GN=MINDY2 PE=1 SV=2
Q2KI23	Ubiquitin carboxyl-terminal hydrolase MINDY-2 OS=Bos taurus OX=9913 GN=MINDY2 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|MINDY\|MINDY

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04424	MINDY_DUB	MINDY deubiquitinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033979	Domain	MINDY deubiquitinase domain	Interproscan
IPR007518	Family	MINDY deubiquitinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18063	NF-E2 INDUCIBLE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:1990380	Molecular Function	K48-linked deubiquitinase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016807	Molecular Function	cysteine-type carboxypeptidase activity	Interproscan
GO:0071108	Biological Process	protein K48-linked deubiquitination	Interproscan
GO:0071944	Cellular Component	cell periphery	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01309	MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala