Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29104.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000019:3457853...3471926
NR annotation: XP_027042438.1, uncharacterized protein LOC113670490 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01890Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans OX=4787 GN=YPT1 PE=3 SV=1
Q5KTJ6Ras-related protein Rab-13 OS=Mesocricetus auratus OX=10036 GN=RAB13 PE=2 SV=1
P35286Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071RasRas familyDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR001806FamilySmall GTPaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR050227FamilyRas-related protein RabInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47977RAS-RELATED PROTEIN RABInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP