Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29115.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000022:46982...50918
NR annotation: CAH3149680.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR006052DomainTumour necrosis factor domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11471TUMOR NECROSIS FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24213C1QTNF9; complement C1q and tumor necrosis factor-related protein 9-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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