Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29298.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000022:1643343...1659748
NR annotation: XP_027038166.1, protein FORGETTER 1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F4IF36Protein FORGETTER 1 OS=Arabidopsis thaliana OX=3702 GN=FGT1 PE=1 SV=1
Q5BJL5Protein strawberry notch homolog 1 OS=Rattus norvegicus OX=10116 GN=Sbno1 PE=1 SV=2
Q689Z5Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13872AAA_34P-loop containing NTP hydrolase pore-1DomainInterproscan
PF13871Helicase_C_4C-terminal domain on Strawberry notch homologueDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026741FamilyProtein strawberry notchInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039187DomainStrawberry notch, AAA domainInterproscan
IPR026937DomainStrawberry notch, helicase C domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706STRAWBERRY NOTCH-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26273SBNO, SNO, FGT1; protein strawberry notch-Chromosome and associated proteinsko03036deepkoala

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