Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29594.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000032:25821...38193
NR annotation: XP_027051989.1, rabphilin-3A-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P47708Rabphilin-3A OS=Mus musculus OX=10090 GN=Rph3a PE=1 SV=2
P47709Rabphilin-3A OS=Rattus norvegicus OX=10116 GN=Rph3a PE=1 SV=1
Q06846Rabphilin-3A OS=Bos taurus OX=9913 GN=RPH3A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02318FYVE_2FYVE-type zinc fingerFamilyInterproscan
PF00168C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR041282DomainFYVE-type zinc fingerInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR043566FamilyRabphilin/Doc2/Noc2Interproscan
IPR000008DomainC2 domainInterproscan
IPR010911DomainRab-binding domainInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001565DomainSynaptotagminInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45729RABPHILIN, ISOFORM AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006887Biological ProcessexocytosisInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19938RPH3A; rabphilin-3A-Membrane traffickingko04131deepkoala

TOP