Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29614.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000032:221807...254564
NR annotation: XP_027046784.1, peripheral-type benzodiazepine receptor-associated protein 1-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8QFX1RIMS-binding protein 2 OS=Gallus gallus OX=9031 GN=RIMBP2 PE=1 SV=1
Q9JIR0Peripheral-type benzodiazepine receptor-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Tspoap1 PE=1 SV=2
Q7TNF8Peripheral-type benzodiazepine receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tspoap1 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040325FamilyRIMS-binding protein 1/2/3Interproscan
IPR001452DomainSH3 domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR035753DomainRIMS-binding protein, second SH3 domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR035755DomainRIMS-binding protein, third SH3 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14234RIM BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007274Biological Processneuromuscular synaptic transmissionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19922TSPOAP1, BZRAP1, RIMBP1; peripheral-type benzodiazepine receptor-associated protein 1-Membrane traffickingko04131deepkoala

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