Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29694.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000032:1169472...1180364
NR annotation: CAH3107901.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96JM7Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens OX=9606 GN=L3MBTL3 PE=1 SV=2
E1C2V1Lethal(3)malignant brain tumor-like protein 1 OS=Gallus gallus OX=9031 GN=L3MBTL1 PE=3 SV=1
Q8NA19Lethal(3)malignant brain tumor-like protein 4 OS=Homo sapiens OX=9606 GN=L3MBTL4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF02820MBTmbt repeatDomainInterproscan
PF01530zf-C2HCZinc finger, C2HC typeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR036060Homologous_superfamilyZinc finger, C2H2C-type superfamilyInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR004092RepeatMbt repeatInterproscan
IPR038603Homologous_superfamilyFCS-type zinc finger superfamilyInterproscan
IPR002515RepeatZinc finger, C2H2C-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24387L3MBTL; lethal(3)malignant brain tumor-like protein-Chromosome and associated proteinsko03036deepkoala

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